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GRDEDIT(1) Generic Mapping Tools GRDEDIT(1)
NAME
grdedit - Modifying the header or content of a 2-D grid file
SYNOPSIS
grdedit grdfile [ -A ] [ -Dxname/yname/zname/scale/offset/title/remark
] [ -E ] [ -Nxyzfile ] [ -Rwest/east/south/north[r] ] [ -S ] [ -T ] [
-V ] [ -:[i|o] ] [ -bi[s|S|d|D[ncol]|c[var1/...]] ] [ -f[i|o]colinfo ]
DESCRIPTION
grdedit reads the header information in a binary 2-D grid file and
replaces the information with values provided on the command line [if
any]. As an option, global, geographical grids (with 360 degrees
longitude range) can be rotated in the east-west direction, and
individual nodal values can be replaced from a table of x, y, z values.
grdedit only operates on files containing a grdheader.
grdfile
Name of the 2-D grid file to modify. (See GRID FILE FORMATS
below).
OPTIONS
No space between the option flag and the associated arguments.
-A If necessary, adjust the file's x_inc, y_inc to be compatible
with its domain (or a new domain set with -R). Older grid files
(i.e., created prior to GMT 3.1) often had excessive slop in
x_inc, y_inc and an adjustment is necessary. Newer files are
created correctly.
-D Give new values for xname, yname, zname, scale, offset, title,
and remark. To leave some of the values untouched, specify = as
the new value. Alternatively, to allow "/" to be part of one of
the values, use any non-alphanumeric character (and not the
equal sign) as separator by both starting and ending with it.
For example: -D:xname:yname:zname:scale:offset:title:remark:
-E Transpose the grid and exchange the x and y information.
Incompatible with the other options.
-H Input file(s) has header record(s). If used, the default number
of header records is N_HEADER_RECS. Use -Hi if only input data
should have header records [Default will write out header
records if the input data have them]. Blank lines and lines
starting with # are always skipped.
-N Read the ASCII (or binary; see -bi) file xyzfile and replace the
corresponding nodal values in the grid with these z values.
-R xmin, xmax, ymin, and ymax specify the Region of interest. For
geographic regions, these limits correspond to west, east,
south, and north and you may specify them in decimal degrees or
in [+-]dd:mm[:ss.xxx][W|E|S|N] format. Append r if lower left
and upper right map coordinates are given instead of w/e/s/n.
The two shorthands -Rg and -Rd stand for global domain (0/360
and -180/+180 in longitude respectively, with -90/+90 in
latitude). Alternatively, specify the name of an existing grid
file and the -R settings (and grid spacing, if applicable) are
copied from the grid. For calendar time coordinates you may
either give (a) relative time (relative to the selected
TIME_EPOCH and in the selected TIME_UNIT; append t to -JX|x), or
(b) absolute time of the form [date]T[clock] (append T to
-JX|x). At least one of date and clock must be present; the T
is always required. The date string must be of the form
[-]yyyy[-mm[-dd]] (Gregorian calendar) or yyyy[-Www[-d]] (ISO
week calendar), while the clock string must be of the form
hh:mm:ss[.xxx]. The use of delimiters and their type and
positions must be exactly as indicated (however, input, output
and plot formats are customizable; see gmtdefaults). The new
w/e/s/n values will replace those in the grid, and the x_inc,
y_inc values are adjusted, if necessary.
-S For global, geographical grids only. Grid values will be
shifted longitudinally according to the new borders given in -R.
-T Make necessary changes in the header to convert a gridline-
registered grid to a pixel-registered grid, or vice-versa.
Basically, gridline-registered grids will have their domain
extended by half the x- and y-increments whereas pixel-
registered grids will have their domain shrunk by the same
amount.
-V Selects verbose mode, which will send progress reports to stderr
[Default runs "silently"].
-bi Selects binary input. Append s for single precision [Default is
d (double)]. Uppercase S or D will force byte-swapping.
Optionally, append ncol, the number of columns in your binary
input file if it exceeds the columns needed by the program. Or
append c if the input file is netCDF. Optionally, append
var1/var2/... to specify the variables to be read. [Default is
3 input columns].
-f Special formatting of input and/or output columns (time or
geographical data). Specify i or o to make this apply only to
input or output [Default applies to both]. Give one or more
columns (or column ranges) separated by commas. Append T
(absolute calendar time), t (relative time in chosen TIME_UNIT
since TIME_EPOCH), x (longitude), y (latitude), or f (floating
point) to each column or column range item. Shorthand -f[i|o]g
means -f[i|o]0x,1y (geographic coordinates).
GRID FILE FORMATS
By default GMT writes out grid as single precision floats in a COARDS-
complaint netCDF file format. However, GMT is able to produce grid
files in many other commonly used grid file formats and also
facilitates so called "packing" of grids, writing out floating point
data as 2- or 4-byte integers. To specify the precision, scale and
offset, the user should add the suffix =id[/scale/offset[/nan]], where
id is a two-letter identifier of the grid type and precision, and scale
and offset are optional scale factor and offset to be applied to all
grid values, and nan is the value used to indicate missing data. When
reading grids, the format is generally automatically recognized. If
not, the same suffix can be added to input grid file names. See
grdreformat(1) and Section 4.17 of the GMT Technical Reference and
Cookbook for more information.
When reading a netCDF file that contains multiple grids, GMT will read,
by default, the first 2-dimensional grid that can find in that file. To
coax GMT into reading another multi-dimensional variable in the grid
file, append ?varname to the file name, where varname is the name of
the variable. Note that you may need to escape the special meaning of ?
in your shell program by putting a backslash in front of it, or by
placing the filename and suffix between quotes or double quotes. The
?varname suffix can also be used for output grids to specify a variable
name different from the default: "z". See grdreformat(1) and Section
4.18 of the GMT Technical Reference and Cookbook for more information,
particularly on how to read splices of 3-, 4-, or 5-dimensional grids.
GEOGRAPHICAL AND TIME COORDINATES
When the output grid type is netCDF, the coordinates will be labeled
"longitude", "latitude", or "time" based on the attributes of the input
data or grid (if any) or on the -f or -R options. For example, both
-f0x -f1t and -R 90w/90e/0t/3t will result in a longitude/time grid.
When the x, y, or z coordinate is time, it will be stored in the grid
as relative time since epoch as specified by TIME_UNIT and TIME_EPOCH
in the .gmtdefaults file or on the command line. In addition, the unit
attribute of the time variable will indicate both this unit and epoch.
EXAMPLES
Let us assume the file data.grd covers the area 300/310/10/30. We want
to change the boundaries from geodetic longitudes to geographic and put
a new title in the header. We accomplish this by
grdedit data.grd -R-60/-50/10/30 -D=/=/=/=/=/"Gravity Anomalies"/=
The grid world.grd has the limits 0/360/-72/72. To shift the data so
that the limits would be -180/180/-72/72, use
grdedit world.grd -R-180/180/-72/72 -S
The file junk.grd was created prior to GMT 3.1 with incompatible -R and
-I arguments. To reset the x- and y-increments we run
grdedit junk.grd -A
The file junk.grd was created prior to GMT 4.1.3 and does not contain
the required information to indicate that the grid is geographic. To
add this information, run
grdedit junk.grd -fg
SEE ALSO
GMT(1), grd2xyz(1), xyz2grd(1)
GMT 4.5.14 1 Nov 2015 GRDEDIT(1)